{ "_id": "6a253d684b233be198399395", "Type": "Package", "Package": "dendrometeR", "Title": "Analyzing Dendrometer Data", "Version": "1.1.1", "Authors@R": "c(person(given = \"Olivier\",\nfamily = \"Bouriaud\",\nrole = \"aut\"),\nperson(given = \"Ernst\",\nfamily = \"van der Maaten\",\nrole = \"aut\"),\nperson(given = \"Marieke\",\nfamily = \"van der Maaten-Theunissen\",\nrole = \"aut\"),\nperson(given = \"Marko\",\nfamily = \"Smiljanic\",\nrole = c(\"aut\", \"cre\"),\nemail = \"marko.smiljanic313@gmail.com\"))", "Maintainer": "Marko Smiljanic ", "Description": "Various functions to import, verify, process and plot\nhigh-resolution dendrometer data using daily and stem-cycle\napproaches as described in Deslauriers et al, 2007\n. For more details about the\npackage please see: Van der Maaten et al. 2016\n.", "License": "GPL (>=2)", "URL": "https://github.com/smiljanicm/dendrometeR", "BugReports": "https://github.com/smiljanicm/dendrometeR/issues", "VignetteBuilder": "knitr", "Encoding": "UTF-8", "LazyData": "true", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.2", "Repository": "https://smiljanicm.r-universe.dev", "Date/Publication": "2025-02-21 13:54:21 UTC", "RemoteUrl": "https://github.com/smiljanicm/dendrometer", "RemoteRef": "HEAD", "RemoteSha": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-07 09:39:56 UTC", "User": "root" }, "Author": "Olivier Bouriaud [aut],\nErnst van der Maaten [aut],\nMarieke van der Maaten-Theunissen [aut],\nMarko Smiljanic [aut, cre]", "MD5sum": "a41ae3a42e9147d789947ec417ffde68", "_user": "smiljanicm", "_type": "src", "_file": "dendrometeR_1.1.1.tar.gz", "_fileid": "3f7a4fdd2d70208a14092947cec2177e5d503b1c2655733c2d28f06cface2172", "_filesize": 519171, "_sha256": "3f7a4fdd2d70208a14092947cec2177e5d503b1c2655733c2d28f06cface2172", "_created": "2026-06-07T09:39:56.000Z", "_published": "2026-06-07T09:44:08.795Z", "_distro": "noble", "_jobs": [ { "job": 79948617645, "time": 135, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7462923215" }, { "job": 79948617647, "time": 134, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7462923016" }, { "job": 79948617670, "time": 202, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7462926412" }, { "job": 79948617659, "time": 195, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7462926347" }, { "job": 79948411745, "time": 209, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7462905555" }, { "job": 79948617639, "time": 110, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7462920049" }, { "job": 79948617664, "time": 224, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7462933427" }, { "job": 79948617650, "time": 102, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7462919108" }, { "job": 79948617654, "time": 102, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7462919020" } ], "_buildurl": "https://github.com/r-universe/smiljanicm/actions/runs/27088811782", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/smiljanicm/dendrometer", "_commit": { "id": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "author": "Marko Smiljanic ", "committer": "Marko Smiljanic ", "message": "Resubmit to CRAN\n", "time": 1740146061 }, "_maintainer": { "name": "Marko Smiljanic", "email": "marko.smiljanic313@gmail.com", "login": "smiljanicm", "description": "", "uuid": 17944680 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.0.0", "role": "Depends" }, { "package": "forecast", "role": "Depends" }, { "package": "graphics", "role": "Depends" }, { "package": "grDevices", "role": "Depends" }, { "package": "pspline", "role": "Depends" }, { "package": "stats", "role": "Depends" }, { "package": "zoo", "role": "Depends" }, { "package": "methods", "role": "Imports" }, { "package": "knitr", "role": "Suggests" } ], "_owner": "smiljanicm", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "smiljanicm", "count": 6, "uuid": 17944680 } ], "_userbio": { "uuid": 17944680, "type": "user", "name": "smiljanicm" }, "_downloads": { "count": 160, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/dendrometeR" }, "_devurl": "https://github.com/smiljanicm/dendrometer", "_searchresults": 17, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/dendrometeR.html", "manual.pdf" ], "_homeurl": "https://github.com/smiljanicm/dendrometer", "_realowner": "smiljanicm", "_cranurl": true, "_releases": [ { "version": "1.0.0", "date": "2016-03-16" }, { "version": "1.1.0", "date": "2024-10-14" }, { "version": "1.1.1", "date": "2025-02-21" } ], "_exports": [ "climate_seg", "cycle_stats", "daily_stats", "dendro.resolution", "fill_gaps", "fill_plot", "is.dendro", "phase_def", "phase_plot" ], "_datasets": [ { "name": "dmCD", "title": "Pre-processed dendrometer data from Camp Daniel, Canada", "object": "dmCD", "class": [ "data.frame" ], "fields": [ "dendro" ], "rows": 6360, "table": true, "tojson": true }, { "name": "dmCDraw", "title": "Raw dendrometer data from Camp Daniel, Canada", "object": "dmCDraw", "class": [ "data.frame" ], "fields": [ "site", "year", "tree", "Month", "Day", "H", "dendro", "M", "S", "MDY", "DHMS" ], "rows": 6360, "table": true, "tojson": true }, { "name": "dmED", "title": "Pre-processed dendrometer data from Eldena, Germany", "object": "dmED", "class": [ "data.frame" ], "fields": [ "Beech03", "Beech04" ], "rows": 11760, "table": true, "tojson": true }, { "name": "dmEDraw", "title": "Raw dendrometer data from Eldena, Germany", "object": "dmEDraw", "class": [ "data.frame" ], "fields": [ "TIMESTAMP", "Beech03", "Beech04" ], "rows": 11760, "table": true, "tojson": true }, { "name": "dmHS", "title": "Pre-processed dendrometer data from Hinnensee, Germany", "object": "dmHS", "class": [ "data.frame" ], "fields": [ "dBUP2" ], "rows": 13392, "table": true, "tojson": true }, { "name": "dmHSraw", "title": "Raw dendrometer data from Hinnensee, Germany", "object": "dmHSraw", "class": [ "data.frame" ], "fields": [ "TIMESTAMP", "DOY", "YEAR", "dBUP2" ], "rows": 13392, "table": true, "tojson": true }, { "name": "envED", "title": "Environmental data from Eldena, Germany", "object": "envED", "class": [ "data.frame" ], "fields": [ "AirTemp", "AirTemp50cm", "SoilTemp10cm" ], "rows": 11760, "table": true, "tojson": true } ], "_help": [ { "page": "climate_seg", "title": "Segmenting climate and environmental data", "topics": [ "climate_seg" ] }, { "page": "cycle_stats", "title": "Define stem cycles and calculate statistics for all cyclic phases", "topics": [ "cycle_stats" ] }, { "page": "daily_stats", "title": "Calculate daily statistics for dendrometer and environmental data", "topics": [ "daily_stats" ] }, { "page": "dendro.resolution", "title": "Check the resolution of the data", "topics": [ "dendro.resolution" ] }, { "page": "dmCD", "title": "Pre-processed dendrometer data from Camp Daniel, Canada", "topics": [ "dmCD" ] }, { "page": "dmCDraw", "title": "Raw dendrometer data from Camp Daniel, Canada", "topics": [ "dmCDraw" ] }, { "page": "dmED", "title": "Pre-processed dendrometer data from Eldena, Germany", "topics": [ "dmED" ] }, { "page": "dmEDraw", "title": "Raw dendrometer data from Eldena, Germany", "topics": [ "dmEDraw" ] }, { "page": "dmHS", "title": "Pre-processed dendrometer data from Hinnensee, Germany", "topics": [ "dmHS" ] }, { "page": "dmHSraw", "title": "Raw dendrometer data from Hinnensee, Germany", "topics": [ "dmHSraw" ] }, { "page": "envED", "title": "Environmental data from Eldena, Germany", "topics": [ "envED" ] }, { "page": "fill_gaps", "title": "Fill gaps in dendrometer series", "topics": [ "fill_gaps" ] }, { "page": "fill_plot", "title": "Plot gap-filled dendrometer series", "topics": [ "fill_plot" ] }, { "page": "is.dendro", "title": "Check input data", "topics": [ "is.dendro" ] }, { "page": "phase_def", "title": "Define stem-cyclic phases", "topics": [ "phase_def" ] }, { "page": "phase_plot", "title": "Plot stem-cyclic phases", "topics": [ "phase_plot" ] } ], "_rundeps": [ "cli", "colorspace", "cpp11", "farver", "forecast", "fracdiff", "generics", "ggplot2", "glue", "gtable", "isoband", "labeling", "lattice", "lifecycle", "lmtest", "magrittr", "nlme", "nnet", "pspline", "R6", "RColorBrewer", "Rcpp", "RcppArmadillo", "rlang", "S7", "scales", "timeDate", "urca", "vctrs", "viridisLite", "withr", "zoo" ], "_vignettes": [ { "source": "data_import.Rmd", "filename": "data_import.html", "title": "Import dendrometer data", "engine": "knitr::rmarkdown", "headings": [ "Description of required data format", "Transformation of dendrometer data", "Example dmCD_raw", "Example dmHS_raw", "Example dmED_raw", "Checking format and resolution of input data", "References" ], "created": "2023-04-12 17:28:53", "modified": "2023-04-12 17:28:53", "commits": 1 } ], "_score": 3.230448921378274, "_indexed": true, "_nocasepkg": "dendrometer", "_universes": [ "smiljanicm" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.1.1", "date": "2026-06-07T09:41:50.000Z", "distro": "noble", "commit": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "fileid": "649ac2f2cc4447c4a51285d5390824d8b5e6d8649e40295b3f35a564fd5640d6", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/smiljanicm/actions/runs/27088811782" }, { "r": "4.6.0", "os": "linux", "version": "1.1.1", "date": "2026-06-07T09:41:47.000Z", "distro": "noble", "commit": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "fileid": "ecd34b0d9b9e4524bcc0ba6f7c06be577e782fd418b249ac168fc04fa9ac795a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/smiljanicm/actions/runs/27088811782" }, { "r": "4.5.3", "os": "mac", "version": "1.1.1", "date": "2026-06-07T09:42:24.000Z", "commit": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "fileid": "68a63cf8f9b84d2b65efb577b6be15a045dd3e12a88826dd0765304ebbcdd790", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/smiljanicm/actions/runs/27088811782" }, { "r": "4.6.0", "os": "mac", "version": "1.1.1", "date": "2026-06-07T09:42:23.000Z", "commit": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "fileid": "181367308003466a30e60aa350a6b83c3a914596e40e22e8701afd2e097f58d3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/smiljanicm/actions/runs/27088811782" }, { "r": "4.6.0", "os": "wasm", "version": "1.1.1", "date": "2026-06-07T09:42:01.000Z", "commit": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "fileid": "6d01fcf4dd4117847a88631e7719a9e2ff71dca41dd246bcc40404f6e2505955", "status": "success", "buildurl": "https://github.com/r-universe/smiljanicm/actions/runs/27088811782" }, { "r": "4.7.0", "os": "win", "version": "1.1.1", "date": "2026-06-07T09:43:13.000Z", "commit": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "fileid": "26296cdc196413e827816f427c52329c67ac6946b7b0c1201472d169ab8cdb8c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/smiljanicm/actions/runs/27088811782" }, { "r": "4.5.3", "os": "win", "version": "1.1.1", "date": "2026-06-07T09:41:04.000Z", "commit": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "fileid": "527eb1d0bf1120bfc49258af8245a43312198e67a5741116c1c748ce3dc3a93d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/smiljanicm/actions/runs/27088811782" }, { "r": "4.6.0", "os": "win", "version": "1.1.1", "date": "2026-06-07T09:41:03.000Z", "commit": "9998073d389d8e32ff2c8d37a280dd8e480610e1", "fileid": "af46929a90b305f82b6470c17b0c39902524d2828df6a775a09b1ca6bd0aa9f3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/smiljanicm/actions/runs/27088811782" } ] }